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Genome sequence-independent identification of RNA editing sites : Nature...
Genome sequence-independent identification of #RNA editing siteshttp://www.nature.com/nmeth/journal/vaop/ncurrent/full/nmeth.3314.html GIREMI uses LD to separate edit sites from #SNPs Qing Zhang &...
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From noncoding variant to phenotype via SORT1 at the 1p13 cholesterol locus :...
From noncoding variant to phenotype…at…#cholesterol locus http://www.nature.com/nature/journal/v466/n7307/full/nature09266.html Gold standard ex of #SNP functional effect: LDL changes Kiran Musunuru,...
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ReplicationDomain – Online database resource for DNA replication timing,...
http://replicationdomain.org/
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My notes from ENCODE Consortium Meeting
links: http://linkstream2.gerstein.info/tag/i0enc15 http://lectures.gersteinlab.org/summary/thoughts-on-ENCODE-annotations–final-i0enc15/
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Robust transcriptome-wide discovery of RNA-binding protein binding sites with...
http://www.nature.com/nmeth/journal/v13/n6/abs/nmeth.3810.html
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GERV: a statistical method for generative evaluation of regulatory variants...
http://bioinformatics.oxfordjournals.org/content/early/2015/11/05/bioinformatics.btv565 GERV: a statistical method for generative evaluation of regulatory variants for transcription factor binding...
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RNA splicing is a primary link between genetic variation and disease | Science
http://science.sciencemag.org/content/352/6285/600.long Yang I. Li1, Bryce van de Geijn2, Anil Raj1, David A. Knowles3,4, Allegra A. Petti5, David Golan1, Yoav Gilad2,*, Jonathan K. Pritchard1,6,7,*
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Top 10 baby names in the US since 1880 – Visual Cinnamon
Great viz http://www.visualcinnamon.com/babynamesus
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dataviz sites from ENCODE mtg
https://d3js.org/ http://amp.pharm.mssm.edu/clustergrammer/ http://bibviz.com/ http://www.visualcinnamon.com/portfolio/top-2000-songs
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GERV: a statis,tical method for generative evaluation of regulatory variants...
GERV: stats method for generative evaluation of regulatory variants for TF binding http://bioinformatics.oxfordjournals.org/content/early/2015/11/05/bioinformatics.btv565 Predicts effect of #allelic...
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